Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps4bP46467 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps4bP46467 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.66■□□□□ 0.58
Vps4bP46467 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.66■□□□□ 0.58
Vps4bP46467 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.66■□□□□ 0.58
Vps4bP46467 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vps4bP46467 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps4bP46467 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps4bP46467 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps4bP46467 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Vps4bP46467 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps4bP46467 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.65■□□□□ 0.58
Vps4bP46467 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4bP46467 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps4bP46467 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps4bP46467 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps4bP46467 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Vps4bP46467 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps4bP46467 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4bP46467 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps4bP46467 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Vps4bP46467 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.63■□□□□ 0.57
Vps4bP46467 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Vps4bP46467 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.63■□□□□ 0.57
Vps4bP46467 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.63■□□□□ 0.57
Vps4bP46467 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps4bP46467 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Vps4bP46467 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.63■□□□□ 0.57
Vps4bP46467 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4bP46467 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.62■□□□□ 0.57
Vps4bP46467 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Vps4bP46467 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.62■□□□□ 0.57
Vps4bP46467 Gm9988-201ENSMUST00000069786 435 ntBASIC18.62■□□□□ 0.57
Vps4bP46467 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
Vps4bP46467 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4bP46467 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.61■□□□□ 0.57
Vps4bP46467 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Vps4bP46467 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Vps4bP46467 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Vps4bP46467 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms