Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sox18P43680 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox18P43680 Gm42790-201ENSMUST00000201268 969 ntBASIC17.62■□□□□ 0.41
Sox18P43680 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.62■□□□□ 0.41
Sox18P43680 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.62■□□□□ 0.41
Sox18P43680 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sox18P43680 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox18P43680 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Sox18P43680 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sox18P43680 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sox18P43680 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox18P43680 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.6■□□□□ 0.41
Sox18P43680 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.6■□□□□ 0.41
Sox18P43680 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox18P43680 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sox18P43680 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Sox18P43680 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Sox18P43680 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox18P43680 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Sox18P43680 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Flg-201ENSMUST00000050758 1488 ntBASIC17.59■□□□□ 0.41
Sox18P43680 Gm11927-201ENSMUST00000118472 759 ntBASIC17.59■□□□□ 0.41
Sox18P43680 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.59■□□□□ 0.41
Sox18P43680 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox18P43680 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sox18P43680 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox18P43680 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox18P43680 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox18P43680 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox18P43680 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox18P43680 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sox18P43680 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox18P43680 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox18P43680 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox18P43680 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.58■□□□□ 0.4
Sox18P43680 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox18P43680 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox18P43680 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox18P43680 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox18P43680 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox18P43680 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Gm23634-201ENSMUST00000175071 91 ntBASIC17.57■□□□□ 0.4
Sox18P43680 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.57■□□□□ 0.4
Sox18P43680 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sox18P43680 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Sox18P43680 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox18P43680 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sox18P43680 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.56■□□□□ 0.4
Sox18P43680 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.56■□□□□ 0.4
Sox18P43680 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.56■□□□□ 0.4
Sox18P43680 Odf3b-204ENSMUST00000227834 930 ntBASIC17.56■□□□□ 0.4
Sox18P43680 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox18P43680 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sox18P43680 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms