Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sdc2P43407 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.65■□□□□ 0.9
Sdc2P43407 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Sdc2P43407 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.65■□□□□ 0.9
Sdc2P43407 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.65■□□□□ 0.9
Sdc2P43407 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.65■□□□□ 0.9
Sdc2P43407 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.65■□□□□ 0.9
Sdc2P43407 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
Sdc2P43407 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sdc2P43407 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sdc2P43407 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.64■□□□□ 0.9
Sdc2P43407 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.64■□□□□ 0.89
Sdc2P43407 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.64■□□□□ 0.89
Sdc2P43407 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sdc2P43407 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc2P43407 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sdc2P43407 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sdc2P43407 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Sdc2P43407 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.63■□□□□ 0.89
Sdc2P43407 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Sdc2P43407 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sdc2P43407 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.63■□□□□ 0.89
Sdc2P43407 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc2P43407 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Sdc2P43407 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sdc2P43407 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.62■□□□□ 0.89
Sdc2P43407 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Sdc2P43407 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.62■□□□□ 0.89
Sdc2P43407 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Sdc2P43407 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc2P43407 Reep4-203ENSMUST00000226563 1444 ntBASIC20.61■□□□□ 0.89
Sdc2P43407 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Sdc2P43407 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.61■□□□□ 0.89
Sdc2P43407 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.61■□□□□ 0.89
Sdc2P43407 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sdc2P43407 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sdc2P43407 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc2P43407 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Sdc2P43407 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Sdc2P43407 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc2P43407 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sdc2P43407 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.59■□□□□ 0.89
Sdc2P43407 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms