Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.29■□□□□ 0.04
Hmx3P42581 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Hmx3P42581 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.29■□□□□ 0.04
Hmx3P42581 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Hmx3P42581 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hmx3P42581 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmx3P42581 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.28■□□□□ 0.04
Hmx3P42581 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmx3P42581 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.28■□□□□ 0.04
Hmx3P42581 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmx3P42581 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmx3P42581 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmx3P42581 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.27■□□□□ 0.04
Hmx3P42581 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmx3P42581 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmx3P42581 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Hmx3P42581 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmx3P42581 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Hmx3P42581 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.27■□□□□ 0.03
Hmx3P42581 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Hmx3P42581 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmx3P42581 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.26■□□□□ 0.03
Hmx3P42581 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmx3P42581 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmx3P42581 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmx3P42581 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 AA386476-201ENSMUST00000098781 1665 ntBASIC15.25■□□□□ 0.03
Hmx3P42581 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmx3P42581 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Hmx3P42581 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.25■□□□□ 0.03
Hmx3P42581 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmx3P42581 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.25■□□□□ 0.03
Hmx3P42581 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmx3P42581 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Hmx3P42581 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Hmx3P42581 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Hmx3P42581 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmx3P42581 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms