Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cxcl12P40224 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.05■□□□□ 0.64
Cxcl12P40224 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl12P40224 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.04■□□□□ 0.64
Cxcl12P40224 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.04■□□□□ 0.64
Cxcl12P40224 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.04■□□□□ 0.64
Cxcl12P40224 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.04■□□□□ 0.64
Cxcl12P40224 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cxcl12P40224 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl12P40224 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl12P40224 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cxcl12P40224 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl12P40224 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.03■□□□□ 0.64
Cxcl12P40224 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cxcl12P40224 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl12P40224 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Cxcl12P40224 Mir5130-201ENSMUST00000175160 84 ntBASIC19.03■□□□□ 0.64
Cxcl12P40224 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.03■□□□□ 0.64
Cxcl12P40224 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cxcl12P40224 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.03■□□□□ 0.64
Cxcl12P40224 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl12P40224 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl12P40224 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl12P40224 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Cxcl12P40224 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl12P40224 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl12P40224 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cxcl12P40224 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl12P40224 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Cxcl12P40224 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19■□□□□ 0.63
Cxcl12P40224 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19■□□□□ 0.63
Cxcl12P40224 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cxcl12P40224 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cxcl12P40224 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cxcl12P40224 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cxcl12P40224 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19■□□□□ 0.63
Cxcl12P40224 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl12P40224 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cxcl12P40224 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.99■□□□□ 0.63
Cxcl12P40224 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Cxcl12P40224 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Cxcl12P40224 Gm2274-201ENSMUST00000184539 609 ntBASIC18.99■□□□□ 0.63
Cxcl12P40224 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.99■□□□□ 0.63
Cxcl12P40224 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.99■□□□□ 0.63
Cxcl12P40224 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl12P40224 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Gm25016-201ENSMUST00000158399 131 ntBASIC18.98■□□□□ 0.63
Cxcl12P40224 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.98■□□□□ 0.63
Cxcl12P40224 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms