Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Timp3P39876 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Timp3P39876 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Timp3P39876 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp3P39876 Gm43859-201ENSMUST00000200075 1412 ntBASIC15□□□□□ -0.01
Timp3P39876 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Timp3P39876 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15□□□□□ -0.01
Timp3P39876 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Timp3P39876 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Timp3P39876 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15□□□□□ -0.01
Timp3P39876 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Gm5540-201ENSMUST00000131852 1848 ntBASIC15□□□□□ -0.01
Timp3P39876 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Timp3P39876 Grk6-206ENSMUST00000224995 2971 ntBASIC14.99□□□□□ -0.01
Timp3P39876 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Timp3P39876 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Timp3P39876 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Timp3P39876 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.99□□□□□ -0.01
Timp3P39876 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.99□□□□□ -0.01
Timp3P39876 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.99□□□□□ -0.01
Timp3P39876 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Timp3P39876 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.99□□□□□ -0.01
Timp3P39876 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Timp3P39876 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Timp3P39876 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Timp3P39876 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Timp3P39876 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Timp3P39876 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Gm8520-201ENSMUST00000186517 868 ntBASIC14.98□□□□□ -0.01
Timp3P39876 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.98□□□□□ -0.01
Timp3P39876 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.98□□□□□ -0.01
Timp3P39876 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Timp3P39876 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Timp3P39876 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.98□□□□□ -0.01
Timp3P39876 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Timp3P39876 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.97□□□□□ -0.01
Timp3P39876 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Timp3P39876 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.97□□□□□ -0.01
Timp3P39876 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Timp3P39876 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Timp3P39876 Gm12527-201ENSMUST00000117967 564 ntBASIC14.97□□□□□ -0.01
Timp3P39876 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.97□□□□□ -0.01
Timp3P39876 Gm10653-202ENSMUST00000139570 835 ntBASIC14.97□□□□□ -0.01
Timp3P39876 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Gm26524-201ENSMUST00000192339 390 ntBASIC14.97□□□□□ -0.01
Timp3P39876 Rab3c-203ENSMUST00000224180 967 ntBASIC14.97□□□□□ -0.01
Timp3P39876 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Timp3P39876 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Timp3P39876 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms