Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Sox5P35710 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sox5P35710 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.09■□□□□ 0.81
Sox5P35710 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.09■□□□□ 0.81
Sox5P35710 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.09■□□□□ 0.81
Sox5P35710 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Sox5P35710 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sox5P35710 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox5P35710 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox5P35710 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox5P35710 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox5P35710 Gm43017-201ENSMUST00000198296 752 ntBASIC20.08■□□□□ 0.81
Sox5P35710 Gm45417-201ENSMUST00000209533 758 ntBASIC20.08■□□□□ 0.81
Sox5P35710 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.08■□□□□ 0.81
Sox5P35710 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox5P35710 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox5P35710 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.08■□□□□ 0.8
Sox5P35710 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox5P35710 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.07■□□□□ 0.8
Sox5P35710 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.07■□□□□ 0.8
Sox5P35710 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox5P35710 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Sox5P35710 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.06■□□□□ 0.8
Sox5P35710 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Sox5P35710 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.06■□□□□ 0.8
Sox5P35710 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox5P35710 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Sox5P35710 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Sox5P35710 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sox5P35710 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sox5P35710 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.05■□□□□ 0.8
Sox5P35710 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.05■□□□□ 0.8
Sox5P35710 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sox5P35710 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.05■□□□□ 0.8
Sox5P35710 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sox5P35710 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.05■□□□□ 0.8
Sox5P35710 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sox5P35710 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox5P35710 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.04■□□□□ 0.8
Sox5P35710 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.04■□□□□ 0.8
Sox5P35710 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.04■□□□□ 0.8
Sox5P35710 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.04■□□□□ 0.8
Sox5P35710 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.04■□□□□ 0.8
Sox5P35710 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.04■□□□□ 0.8
Sox5P35710 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.04■□□□□ 0.8
Sox5P35710 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Sox5P35710 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox5P35710 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sox5P35710 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Sox5P35710 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Sox5P35710 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms