Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Gm15820-201ENSMUST00000201566 728 ntBASIC15.34■□□□□ 0.05
Foxa3P35584 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Foxa3P35584 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa3P35584 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Foxa3P35584 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa3P35584 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa3P35584 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa3P35584 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
Foxa3P35584 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.33■□□□□ 0.04
Foxa3P35584 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Foxa3P35584 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Foxa3P35584 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.33■□□□□ 0.04
Foxa3P35584 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Foxa3P35584 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa3P35584 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Foxa3P35584 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxa3P35584 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.32■□□□□ 0.04
Foxa3P35584 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.32■□□□□ 0.04
Foxa3P35584 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxa3P35584 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa3P35584 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.32■□□□□ 0.04
Foxa3P35584 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.32■□□□□ 0.04
Foxa3P35584 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Foxa3P35584 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.31■□□□□ 0.04
Foxa3P35584 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.31■□□□□ 0.04
Foxa3P35584 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Foxa3P35584 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa3P35584 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.31■□□□□ 0.04
Foxa3P35584 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Foxa3P35584 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.3■□□□□ 0.04
Foxa3P35584 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Foxa3P35584 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Foxa3P35584 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Foxa3P35584 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa3P35584 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa3P35584 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa3P35584 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa3P35584 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms