Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab5cP35278 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab5cP35278 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab5cP35278 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rab5cP35278 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab5cP35278 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.03■□□□□ -0
Rab5cP35278 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.03■□□□□ -0
Rab5cP35278 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rab5cP35278 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rab5cP35278 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.03■□□□□ -0
Rab5cP35278 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Gm7332-201ENSMUST00000118351 454 ntBASIC15.03■□□□□ -0
Rab5cP35278 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rab5cP35278 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab5cP35278 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rab5cP35278 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rab5cP35278 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab5cP35278 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.02■□□□□ -0
Rab5cP35278 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.02■□□□□ -0
Rab5cP35278 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.02■□□□□ -0
Rab5cP35278 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rab5cP35278 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.02□□□□□ -0.01
Rab5cP35278 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab5cP35278 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.01□□□□□ -0.01
Rab5cP35278 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.01□□□□□ -0.01
Rab5cP35278 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rab5cP35278 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rab5cP35278 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab5cP35278 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab5cP35278 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 Gm15743-202ENSMUST00000182690 1901 ntBASIC15□□□□□ -0.01
Rab5cP35278 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15□□□□□ -0.01
Rab5cP35278 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab5cP35278 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms