Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.27■■□□□ 1
Vcam1P29533 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.27■■□□□ 1
Vcam1P29533 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Vcam1P29533 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.27■■□□□ 1
Vcam1P29533 Gm15375-201ENSMUST00000119510 849 ntBASIC21.27■■□□□ 1
Vcam1P29533 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.27■■□□□ 1
Vcam1P29533 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.27■■□□□ 1
Vcam1P29533 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcam1P29533 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.27■□□□□ 0.99
Vcam1P29533 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Vcam1P29533 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vcam1P29533 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Vcam1P29533 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Vcam1P29533 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Gm43183-201ENSMUST00000200632 547 ntBASIC21.26■□□□□ 0.99
Vcam1P29533 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.26■□□□□ 0.99
Vcam1P29533 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vcam1P29533 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vcam1P29533 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcam1P29533 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vcam1P29533 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.25■□□□□ 0.99
Vcam1P29533 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Vcam1P29533 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.25■□□□□ 0.99
Vcam1P29533 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vcam1P29533 Gm18025-201ENSMUST00000221733 862 ntBASIC21.25■□□□□ 0.99
Vcam1P29533 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcam1P29533 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcam1P29533 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.24■□□□□ 0.99
Vcam1P29533 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.24■□□□□ 0.99
Vcam1P29533 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.24■□□□□ 0.99
Vcam1P29533 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.24■□□□□ 0.99
Vcam1P29533 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcam1P29533 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Vcam1P29533 Gm42545-201ENSMUST00000202755 922 ntBASIC21.23■□□□□ 0.99
Vcam1P29533 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Vcam1P29533 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcam1P29533 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcam1P29533 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.22■□□□□ 0.99
Vcam1P29533 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.22■□□□□ 0.99
Vcam1P29533 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.22■□□□□ 0.99
Vcam1P29533 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.22■□□□□ 0.99
Vcam1P29533 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcam1P29533 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcam1P29533 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcam1P29533 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcam1P29533 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.21■□□□□ 0.99
Vcam1P29533 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Vcam1P29533 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Vcam1P29533 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms