Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.07■□□□□ 0.32
BgnP28653 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.07■□□□□ 0.32
BgnP28653 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BgnP28653 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BgnP28653 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BgnP28653 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BgnP28653 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
BgnP28653 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BgnP28653 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
BgnP28653 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BgnP28653 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.05■□□□□ 0.32
BgnP28653 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BgnP28653 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BgnP28653 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.05■□□□□ 0.32
BgnP28653 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BgnP28653 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.04■□□□□ 0.32
BgnP28653 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BgnP28653 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BgnP28653 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BgnP28653 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
BgnP28653 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Gm15820-201ENSMUST00000201566 728 ntBASIC17.04■□□□□ 0.32
BgnP28653 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
BgnP28653 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
BgnP28653 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BgnP28653 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.04■□□□□ 0.32
BgnP28653 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BgnP28653 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.04■□□□□ 0.32
BgnP28653 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.03■□□□□ 0.32
BgnP28653 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BgnP28653 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BgnP28653 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
BgnP28653 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.02■□□□□ 0.32
BgnP28653 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.02■□□□□ 0.32
BgnP28653 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BgnP28653 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BgnP28653 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.02■□□□□ 0.32
BgnP28653 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
BgnP28653 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BgnP28653 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BgnP28653 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms