Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Gm13534-201ENSMUST00000121169 513 ntBASIC16.9■□□□□ 0.3
Cd40lgP27548 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cd40lgP27548 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cd40lgP27548 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.9■□□□□ 0.3
Cd40lgP27548 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40lgP27548 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40lgP27548 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40lgP27548 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40lgP27548 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40lgP27548 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cd40lgP27548 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Cd40lgP27548 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.89■□□□□ 0.29
Cd40lgP27548 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Gm6420-201ENSMUST00000193885 723 ntBASIC16.89■□□□□ 0.29
Cd40lgP27548 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
Cd40lgP27548 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40lgP27548 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd40lgP27548 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Gm12933-201ENSMUST00000120203 872 ntBASIC16.88■□□□□ 0.29
Cd40lgP27548 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Cd40lgP27548 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Cd40lgP27548 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cd40lgP27548 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40lgP27548 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.87■□□□□ 0.29
Cd40lgP27548 Nespas-201ENSMUST00000143738 1083 ntBASIC16.87■□□□□ 0.29
Cd40lgP27548 Mir5133-201ENSMUST00000174955 77 ntBASIC16.87■□□□□ 0.29
Cd40lgP27548 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd40lgP27548 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.87■□□□□ 0.29
Cd40lgP27548 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cd40lgP27548 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.87■□□□□ 0.29
Cd40lgP27548 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40lgP27548 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.86■□□□□ 0.29
Cd40lgP27548 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd40lgP27548 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40lgP27548 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm7290-201ENSMUST00000104990 617 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms