Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.66■□□□□ 0.26
Cd40P27512 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd40P27512 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.65■□□□□ 0.26
Cd40P27512 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cd40P27512 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cd40P27512 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd40P27512 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd40P27512 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.65■□□□□ 0.26
Cd40P27512 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cd40P27512 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cd40P27512 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cd40P27512 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Gm13148-201ENSMUST00000118892 745 ntBASIC16.64■□□□□ 0.25
Cd40P27512 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.64■□□□□ 0.25
Cd40P27512 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cd40P27512 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd40P27512 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cd40P27512 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.64■□□□□ 0.25
Cd40P27512 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cd40P27512 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.63■□□□□ 0.25
Cd40P27512 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd40P27512 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd40P27512 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd40P27512 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.63■□□□□ 0.25
Cd40P27512 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd40P27512 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cd40P27512 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd40P27512 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
Cd40P27512 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.62■□□□□ 0.25
Cd40P27512 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd40P27512 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.62■□□□□ 0.25
Cd40P27512 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd40P27512 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd40P27512 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd40P27512 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Cd40P27512 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.61■□□□□ 0.25
Cd40P27512 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cd40P27512 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Cd40P27512 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cd40P27512 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.61■□□□□ 0.25
Cd40P27512 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cd40P27512 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.61■□□□□ 0.25
Cd40P27512 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cd40P27512 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.61■□□□□ 0.25
Cd40P27512 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms