Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim30aP15533 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim30aP15533 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim30aP15533 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim30aP15533 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30aP15533 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim30aP15533 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Trim30aP15533 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.27■□□□□ 0.84
Trim30aP15533 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim30aP15533 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30aP15533 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30aP15533 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30aP15533 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim30aP15533 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30aP15533 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim30aP15533 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.25■□□□□ 0.83
Trim30aP15533 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30aP15533 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim30aP15533 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Trim30aP15533 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30aP15533 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim30aP15533 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.24■□□□□ 0.83
Trim30aP15533 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30aP15533 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30aP15533 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trim30aP15533 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim30aP15533 Gm7332-201ENSMUST00000118351 454 ntBASIC20.23■□□□□ 0.83
Trim30aP15533 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim30aP15533 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim30aP15533 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30aP15533 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim30aP15533 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim30aP15533 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim30aP15533 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Trim30aP15533 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30aP15533 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim30aP15533 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.21■□□□□ 0.83
Trim30aP15533 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.21■□□□□ 0.83
Trim30aP15533 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trim30aP15533 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Trim30aP15533 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30aP15533 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Trim30aP15533 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim30aP15533 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30aP15533 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30aP15533 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.2■□□□□ 0.82
Trim30aP15533 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30aP15533 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim30aP15533 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30aP15533 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30aP15533 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms