Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hoxc6P10629 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hoxc6P10629 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc6P10629 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc6P10629 Gm15375-201ENSMUST00000119510 849 ntBASIC20.52■□□□□ 0.88
Hoxc6P10629 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.52■□□□□ 0.88
Hoxc6P10629 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc6P10629 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc6P10629 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
Hoxc6P10629 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxc6P10629 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxc6P10629 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxc6P10629 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Gm30025-201ENSMUST00000218555 728 ntBASIC20.51■□□□□ 0.87
Hoxc6P10629 Odf3b-204ENSMUST00000227834 930 ntBASIC20.51■□□□□ 0.87
Hoxc6P10629 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc6P10629 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Hoxc6P10629 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc6P10629 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.5■□□□□ 0.87
Hoxc6P10629 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc6P10629 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxc6P10629 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc6P10629 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc6P10629 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc6P10629 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Hoxc6P10629 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc6P10629 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.5■□□□□ 0.87
Hoxc6P10629 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Hoxc6P10629 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.49■□□□□ 0.87
Hoxc6P10629 Gm38285-201ENSMUST00000192928 922 ntBASIC20.49■□□□□ 0.87
Hoxc6P10629 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.49■□□□□ 0.87
Hoxc6P10629 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc6P10629 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.49■□□□□ 0.87
Hoxc6P10629 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc6P10629 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc6P10629 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hoxc6P10629 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hoxc6P10629 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc6P10629 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc6P10629 Gm13559-201ENSMUST00000120476 863 ntBASIC20.48■□□□□ 0.87
Hoxc6P10629 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc6P10629 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc6P10629 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc6P10629 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.48■□□□□ 0.87
Hoxc6P10629 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hoxc6P10629 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.47■□□□□ 0.87
Hoxc6P10629 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.47■□□□□ 0.87
Hoxc6P10629 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc6P10629 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.46■□□□□ 0.87
Hoxc6P10629 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.46■□□□□ 0.87
Hoxc6P10629 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.46■□□□□ 0.87
Hoxc6P10629 Gm37292-201ENSMUST00000192062 758 ntBASIC20.46■□□□□ 0.87
Hoxc6P10629 Gm42545-201ENSMUST00000202755 922 ntBASIC20.46■□□□□ 0.87
Hoxc6P10629 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc6P10629 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.45■□□□□ 0.87
Hoxc6P10629 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hoxc6P10629 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.45■□□□□ 0.86
Hoxc6P10629 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hoxc6P10629 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.45■□□□□ 0.86
Hoxc6P10629 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms