Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.76■□□□□ 0.75
Hoxc8P09025 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.76■□□□□ 0.75
Hoxc8P09025 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.75■□□□□ 0.75
Hoxc8P09025 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.75■□□□□ 0.75
Hoxc8P09025 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc8P09025 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Gm3375-201ENSMUST00000203929 796 ntBASIC19.74■□□□□ 0.75
Hoxc8P09025 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.74■□□□□ 0.75
Hoxc8P09025 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.74■□□□□ 0.75
Hoxc8P09025 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc8P09025 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hoxc8P09025 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc8P09025 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxc8P09025 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.73■□□□□ 0.75
Hoxc8P09025 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc8P09025 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc8P09025 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.72■□□□□ 0.75
Hoxc8P09025 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc8P09025 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Mir2861-201ENSMUST00000175539 82 ntBASIC19.72■□□□□ 0.75
Hoxc8P09025 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc8P09025 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.72■□□□□ 0.75
Hoxc8P09025 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc8P09025 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc8P09025 Gm13559-201ENSMUST00000120476 863 ntBASIC19.71■□□□□ 0.75
Hoxc8P09025 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Gm30025-201ENSMUST00000218555 728 ntBASIC19.71■□□□□ 0.75
Hoxc8P09025 Timm23-208ENSMUST00000226683 750 ntBASIC19.71■□□□□ 0.75
Hoxc8P09025 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.71■□□□□ 0.75
Hoxc8P09025 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hoxc8P09025 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Gm12382-201ENSMUST00000122005 922 ntBASIC19.7■□□□□ 0.74
Hoxc8P09025 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc8P09025 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms