Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sod1P08228 Mir6349-201ENSMUST00000184059 97 ntBASIC17.4■□□□□ 0.38
Sod1P08228 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Sod1P08228 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sod1P08228 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sod1P08228 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Sod1P08228 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sod1P08228 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Sod1P08228 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Sod1P08228 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sod1P08228 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Gm10231-201ENSMUST00000181584 441 ntBASIC17.39■□□□□ 0.37
Sod1P08228 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Gm10175-202ENSMUST00000208752 441 ntBASIC17.39■□□□□ 0.37
Sod1P08228 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sod1P08228 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sod1P08228 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sod1P08228 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sod1P08228 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sod1P08228 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sod1P08228 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Odf3b-204ENSMUST00000227834 930 ntBASIC17.37■□□□□ 0.37
Sod1P08228 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sod1P08228 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.37■□□□□ 0.37
Sod1P08228 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.37■□□□□ 0.37
Sod1P08228 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sod1P08228 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
Sod1P08228 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sod1P08228 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sod1P08228 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sod1P08228 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Sod1P08228 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 Gm30025-201ENSMUST00000218555 728 ntBASIC17.36■□□□□ 0.37
Sod1P08228 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sod1P08228 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sod1P08228 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.36■□□□□ 0.37
Sod1P08228 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.36■□□□□ 0.37
Sod1P08228 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sod1P08228 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Sod1P08228 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Gm12382-201ENSMUST00000122005 922 ntBASIC17.35■□□□□ 0.37
Sod1P08228 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.35■□□□□ 0.37
Sod1P08228 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.35■□□□□ 0.37
Sod1P08228 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.35■□□□□ 0.37
Sod1P08228 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sod1P08228 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sod1P08228 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sod1P08228 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Gm3375-201ENSMUST00000203929 796 ntBASIC17.34■□□□□ 0.37
Sod1P08228 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.34■□□□□ 0.37
Sod1P08228 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.34■□□□□ 0.37
Sod1P08228 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.34■□□□□ 0.37
Sod1P08228 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sod1P08228 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms