Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.38■□□□□ 0.37
ApoeP08226 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.38■□□□□ 0.37
ApoeP08226 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ApoeP08226 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ApoeP08226 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ApoeP08226 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.37■□□□□ 0.37
ApoeP08226 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.37■□□□□ 0.37
ApoeP08226 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.37■□□□□ 0.37
ApoeP08226 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.37■□□□□ 0.37
ApoeP08226 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ApoeP08226 Fst-202ENSMUST00000223640 2612 ntBASIC17.36■□□□□ 0.37
ApoeP08226 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ApoeP08226 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.36■□□□□ 0.37
ApoeP08226 Gm45102-201ENSMUST00000207427 857 ntBASIC17.36■□□□□ 0.37
ApoeP08226 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.36■□□□□ 0.37
ApoeP08226 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.36■□□□□ 0.37
ApoeP08226 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ApoeP08226 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.35■□□□□ 0.37
ApoeP08226 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.35■□□□□ 0.37
ApoeP08226 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ApoeP08226 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ApoeP08226 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ApoeP08226 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.35■□□□□ 0.37
ApoeP08226 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ApoeP08226 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ApoeP08226 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ApoeP08226 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.35■□□□□ 0.37
ApoeP08226 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.35■□□□□ 0.37
ApoeP08226 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.34■□□□□ 0.37
ApoeP08226 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.34■□□□□ 0.37
ApoeP08226 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.34■□□□□ 0.37
ApoeP08226 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.34■□□□□ 0.37
ApoeP08226 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ApoeP08226 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ApoeP08226 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ApoeP08226 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ApoeP08226 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.33■□□□□ 0.37
ApoeP08226 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ApoeP08226 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ApoeP08226 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms