Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
P04224 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
P04224 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.14■□□□□ 0.17
P04224 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.14■□□□□ 0.17
P04224 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04224 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.14■□□□□ 0.17
P04224 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.13■□□□□ 0.17
P04224 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.13■□□□□ 0.17
P04224 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.13■□□□□ 0.17
P04224 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.13■□□□□ 0.17
P04224 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.13■□□□□ 0.17
P04224 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.13■□□□□ 0.17
P04224 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.13■□□□□ 0.17
P04224 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.13■□□□□ 0.17
P04224 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.13■□□□□ 0.17
P04224 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
P04224 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04224 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
P04224 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Gm9959-201ENSMUST00000068277 390 ntBASIC16.12■□□□□ 0.17
P04224 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P04224 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
P04224 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P04224 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04224 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
P04224 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
P04224 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.11■□□□□ 0.17
P04224 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
P04224 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.11■□□□□ 0.17
P04224 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04224 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.1■□□□□ 0.17
P04224 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
P04224 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
P04224 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.1■□□□□ 0.17
P04224 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.1■□□□□ 0.17
P04224 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
P04224 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.1■□□□□ 0.17
P04224 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
P04224 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04224 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.09■□□□□ 0.17
P04224 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04224 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04224 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04224 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms