Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ifnb1P01575 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ifnb1P01575 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Ifnb1P01575 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ifnb1P01575 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.41■□□□□ 0.7
Ifnb1P01575 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.41■□□□□ 0.7
Ifnb1P01575 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.41■□□□□ 0.7
Ifnb1P01575 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.41■□□□□ 0.7
Ifnb1P01575 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.41■□□□□ 0.7
Ifnb1P01575 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifnb1P01575 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ifnb1P01575 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ifnb1P01575 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.4■□□□□ 0.7
Ifnb1P01575 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.4■□□□□ 0.7
Ifnb1P01575 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ifnb1P01575 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Ifnb1P01575 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.4■□□□□ 0.7
Ifnb1P01575 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ifnb1P01575 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ifnb1P01575 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ifnb1P01575 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ifnb1P01575 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ifnb1P01575 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.39■□□□□ 0.69
Ifnb1P01575 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.39■□□□□ 0.69
Ifnb1P01575 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifnb1P01575 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ifnb1P01575 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ifnb1P01575 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ifnb1P01575 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ifnb1P01575 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Gm10033-202ENSMUST00000211874 928 ntBASIC19.38■□□□□ 0.69
Ifnb1P01575 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.38■□□□□ 0.69
Ifnb1P01575 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifnb1P01575 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Ifnb1P01575 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ifnb1P01575 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ifnb1P01575 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
Ifnb1P01575 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ifnb1P01575 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ifnb1P01575 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ifnb1P01575 Nespas-201ENSMUST00000143738 1083 ntBASIC19.37■□□□□ 0.69
Ifnb1P01575 Gm18671-201ENSMUST00000214826 683 ntBASIC19.37■□□□□ 0.69
Ifnb1P01575 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifnb1P01575 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Gm6420-201ENSMUST00000193885 723 ntBASIC19.36■□□□□ 0.69
Ifnb1P01575 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ifnb1P01575 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifnb1P01575 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.35■□□□□ 0.69
Ifnb1P01575 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms