Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sp1O89090 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.65■□□□□ 0.58
Sp1O89090 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Flg-201ENSMUST00000050758 1488 ntBASIC18.65■□□□□ 0.58
Sp1O89090 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sp1O89090 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sp1O89090 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.64■□□□□ 0.57
Sp1O89090 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp1O89090 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp1O89090 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp1O89090 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp1O89090 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
Sp1O89090 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.63■□□□□ 0.57
Sp1O89090 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.63■□□□□ 0.57
Sp1O89090 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.63■□□□□ 0.57
Sp1O89090 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sp1O89090 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp1O89090 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sp1O89090 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.62■□□□□ 0.57
Sp1O89090 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp1O89090 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.61■□□□□ 0.57
Sp1O89090 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sp1O89090 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sp1O89090 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sp1O89090 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp1O89090 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Sp1O89090 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.6■□□□□ 0.57
Sp1O89090 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.6■□□□□ 0.57
Sp1O89090 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.6■□□□□ 0.57
Sp1O89090 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.6■□□□□ 0.57
Sp1O89090 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Sp1O89090 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
Sp1O89090 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp1O89090 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.59■□□□□ 0.57
Sp1O89090 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Zfp783-201ENSMUST00000095946 670 ntBASIC18.59■□□□□ 0.57
Sp1O89090 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Sp1O89090 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.59■□□□□ 0.57
Sp1O89090 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp1O89090 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sp1O89090 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp1O89090 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sp1O89090 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sp1O89090 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp1O89090 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp1O89090 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp1O89090 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.58■□□□□ 0.56
Sp1O89090 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Sp1O89090 Gm18666-201ENSMUST00000190039 958 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms