Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.98■□□□□ 0.63
Syn1O88935 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Syn1O88935 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Syn1O88935 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 Gm25925-201ENSMUST00000158314 306 ntBASIC18.96■□□□□ 0.63
Syn1O88935 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.96■□□□□ 0.63
Syn1O88935 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Syn1O88935 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Syn1O88935 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syn1O88935 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Syn1O88935 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.95■□□□□ 0.62
Syn1O88935 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Syn1O88935 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Syn1O88935 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Syn1O88935 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
Syn1O88935 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.95■□□□□ 0.62
Syn1O88935 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.95■□□□□ 0.62
Syn1O88935 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Syn1O88935 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syn1O88935 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Syn1O88935 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.94■□□□□ 0.62
Syn1O88935 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Syn1O88935 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.94■□□□□ 0.62
Syn1O88935 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Syn1O88935 Gm42545-201ENSMUST00000202755 922 ntBASIC18.94■□□□□ 0.62
Syn1O88935 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
Syn1O88935 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.94■□□□□ 0.62
Syn1O88935 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syn1O88935 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Syn1O88935 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.93■□□□□ 0.62
Syn1O88935 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.93■□□□□ 0.62
Syn1O88935 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Syn1O88935 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syn1O88935 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.93■□□□□ 0.62
Syn1O88935 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Syn1O88935 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Syn1O88935 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Gm17971-201ENSMUST00000190239 806 ntBASIC18.92■□□□□ 0.62
Syn1O88935 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.92■□□□□ 0.62
Syn1O88935 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syn1O88935 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.91■□□□□ 0.62
Syn1O88935 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syn1O88935 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.91■□□□□ 0.62
Syn1O88935 Gm18025-201ENSMUST00000221733 862 ntBASIC18.91■□□□□ 0.62
Syn1O88935 Gm18032-201ENSMUST00000222541 538 ntBASIC18.91■□□□□ 0.62
Syn1O88935 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syn1O88935 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syn1O88935 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syn1O88935 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syn1O88935 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Syn1O88935 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.9■□□□□ 0.62
Syn1O88935 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.9■□□□□ 0.62
Syn1O88935 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.9■□□□□ 0.62
Syn1O88935 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms