Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.87■□□□□ 0.45
ClppO88696 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ClppO88696 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.87■□□□□ 0.45
ClppO88696 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.87■□□□□ 0.45
ClppO88696 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Gm26524-201ENSMUST00000192339 390 ntBASIC17.87■□□□□ 0.45
ClppO88696 Gm20049-201ENSMUST00000219950 730 ntBASIC17.87■□□□□ 0.45
ClppO88696 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ClppO88696 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.87■□□□□ 0.45
ClppO88696 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClppO88696 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.86■□□□□ 0.45
ClppO88696 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.86■□□□□ 0.45
ClppO88696 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ClppO88696 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClppO88696 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ClppO88696 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ClppO88696 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ClppO88696 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Gm22240-201ENSMUST00000175225 82 ntBASIC17.85■□□□□ 0.45
ClppO88696 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ClppO88696 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.85■□□□□ 0.45
ClppO88696 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Rab3c-203ENSMUST00000224180 967 ntBASIC17.85■□□□□ 0.45
ClppO88696 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ClppO88696 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
ClppO88696 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ClppO88696 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClppO88696 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ClppO88696 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.84■□□□□ 0.45
ClppO88696 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
ClppO88696 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClppO88696 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
ClppO88696 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.83■□□□□ 0.45
ClppO88696 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ClppO88696 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ClppO88696 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ClppO88696 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
ClppO88696 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ClppO88696 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClppO88696 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClppO88696 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.83■□□□□ 0.44
ClppO88696 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.83■□□□□ 0.44
ClppO88696 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClppO88696 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.83■□□□□ 0.44
ClppO88696 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClppO88696 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
ClppO88696 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.83■□□□□ 0.44
ClppO88696 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.82■□□□□ 0.44
ClppO88696 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
ClppO88696 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ClppO88696 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ClppO88696 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClppO88696 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ClppO88696 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ClppO88696 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ClppO88696 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms