Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a20bO88575 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a20bO88575 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a20bO88575 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a20bO88575 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.16■□□□□ 0.82
Slc6a20bO88575 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Gm10013-201ENSMUST00000106074 672 ntBASIC20.16■□□□□ 0.82
Slc6a20bO88575 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Gm18959-201ENSMUST00000208954 655 ntBASIC20.16■□□□□ 0.82
Slc6a20bO88575 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a20bO88575 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a20bO88575 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a20bO88575 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.14■□□□□ 0.81
Slc6a20bO88575 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a20bO88575 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a20bO88575 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a20bO88575 AA414768-201ENSMUST00000121924 1257 ntBASIC20.14■□□□□ 0.81
Slc6a20bO88575 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc6a20bO88575 Gm33142-201ENSMUST00000193913 867 ntBASIC20.14■□□□□ 0.81
Slc6a20bO88575 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a20bO88575 Gm18032-201ENSMUST00000222541 538 ntBASIC20.14■□□□□ 0.81
Slc6a20bO88575 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.14■□□□□ 0.81
Slc6a20bO88575 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Gm12382-201ENSMUST00000122005 922 ntBASIC20.13■□□□□ 0.81
Slc6a20bO88575 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a20bO88575 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a20bO88575 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Gm38285-201ENSMUST00000192928 922 ntBASIC20.11■□□□□ 0.81
Slc6a20bO88575 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.11■□□□□ 0.81
Slc6a20bO88575 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a20bO88575 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a20bO88575 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Ank2-226ENSMUST00000189368 339 ntBASIC20.09■□□□□ 0.81
Slc6a20bO88575 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a20bO88575 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a20bO88575 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms