Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Cops6O88545 Gm37055-201ENSMUST00000191866 133 ntBASIC22.55■■□□□ 1.2
Cops6O88545 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.55■■□□□ 1.2
Cops6O88545 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cops6O88545 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cops6O88545 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Cops6O88545 Gm38285-201ENSMUST00000192928 922 ntBASIC22.54■■□□□ 1.2
Cops6O88545 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cops6O88545 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.53■■□□□ 1.2
Cops6O88545 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Cops6O88545 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.53■■□□□ 1.2
Cops6O88545 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.53■■□□□ 1.2
Cops6O88545 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.53■■□□□ 1.2
Cops6O88545 Gm10138-203ENSMUST00000206952 366 ntBASIC22.53■■□□□ 1.2
Cops6O88545 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.53■■□□□ 1.2
Cops6O88545 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Cops6O88545 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cops6O88545 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cops6O88545 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cops6O88545 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cops6O88545 Gm15565-201ENSMUST00000118890 427 ntBASIC22.52■■□□□ 1.2
Cops6O88545 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.52■■□□□ 1.2
Cops6O88545 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Cops6O88545 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cops6O88545 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Cops6O88545 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cops6O88545 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cops6O88545 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Cops6O88545 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Cops6O88545 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cops6O88545 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cops6O88545 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cops6O88545 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Cops6O88545 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cops6O88545 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Cops6O88545 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.5■■□□□ 1.19
Cops6O88545 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cops6O88545 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.49■■□□□ 1.19
Cops6O88545 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Gm43183-201ENSMUST00000200632 547 ntBASIC22.49■■□□□ 1.19
Cops6O88545 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Cops6O88545 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Cops6O88545 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.49■■□□□ 1.19
Cops6O88545 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cops6O88545 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.48■■□□□ 1.19
Cops6O88545 Mir5122-201ENSMUST00000175004 89 ntBASIC22.48■■□□□ 1.19
Cops6O88545 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.48■■□□□ 1.19
Cops6O88545 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.48■■□□□ 1.19
Cops6O88545 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.48■■□□□ 1.19
Cops6O88545 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.48■■□□□ 1.19
Cops6O88545 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Cops6O88545 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.48■■□□□ 1.19
Cops6O88545 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cops6O88545 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.47■■□□□ 1.19
Cops6O88545 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.47■■□□□ 1.19
Cops6O88545 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 Gm15375-201ENSMUST00000119510 849 ntBASIC22.47■■□□□ 1.19
Cops6O88545 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Cops6O88545 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cops6O88545 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cops6O88545 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms