Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cops4O88544 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.97■□□□□ 0.31
Cops4O88544 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.97■□□□□ 0.31
Cops4O88544 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cops4O88544 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Cops4O88544 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Cops4O88544 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.96■□□□□ 0.31
Cops4O88544 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops4O88544 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops4O88544 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops4O88544 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cops4O88544 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.95■□□□□ 0.3
Cops4O88544 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cops4O88544 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cops4O88544 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.95■□□□□ 0.3
Cops4O88544 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops4O88544 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cops4O88544 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.94■□□□□ 0.3
Cops4O88544 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.94■□□□□ 0.3
Cops4O88544 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Cops4O88544 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops4O88544 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.93■□□□□ 0.3
Cops4O88544 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cops4O88544 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cops4O88544 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.93■□□□□ 0.3
Cops4O88544 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cops4O88544 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.93■□□□□ 0.3
Cops4O88544 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Gm43137-201ENSMUST00000198052 594 ntBASIC16.92■□□□□ 0.3
Cops4O88544 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cops4O88544 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.92■□□□□ 0.3
Cops4O88544 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cops4O88544 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops4O88544 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cops4O88544 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.91■□□□□ 0.3
Cops4O88544 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms