Protein–RNA interactions for Protein: O88454

Kcnk4, Potassium channel subfamily K member 4, mousemouse

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnk4O88454 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.18■□□□□ 0.5
Kcnk4O88454 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Kcnk4O88454 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnk4O88454 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.18■□□□□ 0.5
Kcnk4O88454 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnk4O88454 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Kcnk4O88454 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.17■□□□□ 0.5
Kcnk4O88454 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.17■□□□□ 0.5
Kcnk4O88454 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.17■□□□□ 0.5
Kcnk4O88454 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kcnk4O88454 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnk4O88454 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.16■□□□□ 0.5
Kcnk4O88454 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Kcnk4O88454 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.16■□□□□ 0.5
Kcnk4O88454 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnk4O88454 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Kcnk4O88454 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcnk4O88454 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.15■□□□□ 0.5
Kcnk4O88454 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Kcnk4O88454 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Kcnk4O88454 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Kcnk4O88454 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.14■□□□□ 0.49
Kcnk4O88454 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Kcnk4O88454 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Kcnk4O88454 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Kcnk4O88454 Gm13146-201ENSMUST00000118508 780 ntBASIC18.13■□□□□ 0.49
Kcnk4O88454 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Kcnk4O88454 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.13■□□□□ 0.49
Kcnk4O88454 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.13■□□□□ 0.49
Kcnk4O88454 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Kcnk4O88454 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Kcnk4O88454 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Kcnk4O88454 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
Kcnk4O88454 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Kcnk4O88454 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.11■□□□□ 0.49
Kcnk4O88454 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Kcnk4O88454 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Kcnk4O88454 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Kcnk4O88454 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Kcnk4O88454 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms