Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr1O70481 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ubr1O70481 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr1O70481 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
Ubr1O70481 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC24.13■■□□□ 1.45
Ubr1O70481 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ubr1O70481 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr1O70481 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr1O70481 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr1O70481 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Ubr1O70481 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC24.12■■□□□ 1.45
Ubr1O70481 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Ubr1O70481 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC24.12■■□□□ 1.45
Ubr1O70481 Gm11539-201ENSMUST00000119837 557 ntBASIC24.12■■□□□ 1.45
Ubr1O70481 Gm13436-201ENSMUST00000120418 567 ntBASIC24.12■■□□□ 1.45
Ubr1O70481 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Ubr1O70481 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC24.12■■□□□ 1.45
Ubr1O70481 Odf3b-204ENSMUST00000227834 930 ntBASIC24.12■■□□□ 1.45
Ubr1O70481 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
Ubr1O70481 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr1O70481 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Ubr1O70481 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Ubr1O70481 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC24.11■■□□□ 1.45
Ubr1O70481 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr1O70481 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC24.11■■□□□ 1.45
Ubr1O70481 Gm7712-202ENSMUST00000222331 1510 ntBASIC24.11■■□□□ 1.45
Ubr1O70481 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr1O70481 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr1O70481 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr1O70481 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr1O70481 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr1O70481 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr1O70481 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr1O70481 Gm10654-201ENSMUST00000098653 1633 ntBASIC24.1■■□□□ 1.45
Ubr1O70481 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC24.1■■□□□ 1.45
Ubr1O70481 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Ubr1O70481 Gm30025-201ENSMUST00000218555 728 ntBASIC24.1■■□□□ 1.45
Ubr1O70481 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Ubr1O70481 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 AC124581.1-201ENSMUST00000225416 1399 ntBASIC24.09■■□□□ 1.45
Ubr1O70481 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Ubr1O70481 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr1O70481 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC24.09■■□□□ 1.45
Ubr1O70481 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ubr1O70481 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr1O70481 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC24.08■■□□□ 1.44
Ubr1O70481 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr1O70481 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr1O70481 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr1O70481 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr1O70481 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Gm13559-201ENSMUST00000120476 863 ntBASIC24.07■■□□□ 1.44
Ubr1O70481 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr1O70481 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Ubr1O70481 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Ubr1O70481 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Ubr1O70481 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC24.06■■□□□ 1.44
Ubr1O70481 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr1O70481 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr1O70481 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr1O70481 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr1O70481 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr1O70481 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC24.06■■□□□ 1.44
Ubr1O70481 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Ubr1O70481 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC24.06■■□□□ 1.44
Ubr1O70481 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr1O70481 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr1O70481 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr1O70481 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr1O70481 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC24.05■■□□□ 1.44
Ubr1O70481 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr1O70481 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC24.04■■□□□ 1.44
Ubr1O70481 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC24.04■■□□□ 1.44
Ubr1O70481 AC156016.1-201ENSMUST00000227190 1035 ntBASIC24.04■■□□□ 1.44
Ubr1O70481 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms