Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.15■□□□□ 0.5
Pdlim1O70400 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.15■□□□□ 0.5
Pdlim1O70400 Gm5408-201ENSMUST00000197998 747 ntBASIC18.15■□□□□ 0.5
Pdlim1O70400 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.15■□□□□ 0.5
Pdlim1O70400 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.15■□□□□ 0.5
Pdlim1O70400 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pdlim1O70400 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim1O70400 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim1O70400 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.14■□□□□ 0.49
Pdlim1O70400 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Gm4968-201ENSMUST00000071458 858 ntBASIC18.14■□□□□ 0.49
Pdlim1O70400 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim1O70400 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pdlim1O70400 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.13■□□□□ 0.49
Pdlim1O70400 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.13■□□□□ 0.49
Pdlim1O70400 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.13■□□□□ 0.49
Pdlim1O70400 Gm44549-201ENSMUST00000208351 577 ntBASIC18.13■□□□□ 0.49
Pdlim1O70400 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pdlim1O70400 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Pdlim1O70400 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim1O70400 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pdlim1O70400 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdlim1O70400 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdlim1O70400 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim1O70400 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pdlim1O70400 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
Pdlim1O70400 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pdlim1O70400 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.11■□□□□ 0.49
Pdlim1O70400 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim1O70400 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdlim1O70400 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.1■□□□□ 0.49
Pdlim1O70400 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.1■□□□□ 0.49
Pdlim1O70400 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.1■□□□□ 0.49
Pdlim1O70400 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim1O70400 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim1O70400 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim1O70400 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim1O70400 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim1O70400 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pdlim1O70400 Gm12441-201ENSMUST00000121806 588 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms