Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rdh5O55240 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rdh5O55240 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.42■□□□□ 0.38
Rdh5O55240 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rdh5O55240 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Rdh5O55240 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rdh5O55240 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rdh5O55240 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.41■□□□□ 0.38
Rdh5O55240 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.41■□□□□ 0.38
Rdh5O55240 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rdh5O55240 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Rdh5O55240 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rdh5O55240 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rdh5O55240 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.4■□□□□ 0.38
Rdh5O55240 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.4■□□□□ 0.38
Rdh5O55240 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh5O55240 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh5O55240 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rdh5O55240 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.4■□□□□ 0.38
Rdh5O55240 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Rdh5O55240 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh5O55240 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh5O55240 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.39■□□□□ 0.37
Rdh5O55240 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rdh5O55240 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh5O55240 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh5O55240 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rdh5O55240 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.38■□□□□ 0.37
Rdh5O55240 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rdh5O55240 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.38■□□□□ 0.37
Rdh5O55240 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rdh5O55240 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.37■□□□□ 0.37
Rdh5O55240 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.37■□□□□ 0.37
Rdh5O55240 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Rdh5O55240 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rdh5O55240 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rdh5O55240 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.36■□□□□ 0.37
Rdh5O55240 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rdh5O55240 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.36■□□□□ 0.37
Rdh5O55240 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rdh5O55240 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rdh5O55240 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rdh5O55240 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms