Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl35aO55142 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl35aO55142 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.69□□□□□ -0.22
Rpl35aO55142 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rpl35aO55142 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rpl35aO55142 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl35aO55142 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpl35aO55142 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpl35aO55142 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpl35aO55142 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.68□□□□□ -0.22
Rpl35aO55142 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpl35aO55142 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpl35aO55142 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rpl35aO55142 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Gm7290-201ENSMUST00000104990 617 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.67□□□□□ -0.22
Rpl35aO55142 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Gm12918-201ENSMUST00000120234 636 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Gm15710-201ENSMUST00000121821 636 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpl35aO55142 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Gm5075-201ENSMUST00000196916 622 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.67□□□□□ -0.22
Rpl35aO55142 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpl35aO55142 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpl35aO55142 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rpl35aO55142 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.66□□□□□ -0.22
Rpl35aO55142 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.66□□□□□ -0.22
Rpl35aO55142 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Rpl35aO55142 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rpl35aO55142 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.66□□□□□ -0.22
Rpl35aO55142 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpl35aO55142 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.65□□□□□ -0.22
Rpl35aO55142 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Gm6211-202ENSMUST00000167849 925 ntBASIC13.65□□□□□ -0.22
Rpl35aO55142 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpl35aO55142 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpl35aO55142 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpl35aO55142 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpl35aO55142 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl35aO55142 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rpl35aO55142 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Rpl35aO55142 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms