Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trdmt1O55055 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trdmt1O55055 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trdmt1O55055 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trdmt1O55055 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.37■□□□□ 0.85
Trdmt1O55055 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trdmt1O55055 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trdmt1O55055 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trdmt1O55055 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trdmt1O55055 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trdmt1O55055 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trdmt1O55055 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trdmt1O55055 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trdmt1O55055 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trdmt1O55055 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trdmt1O55055 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trdmt1O55055 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.35■□□□□ 0.85
Trdmt1O55055 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.35■□□□□ 0.85
Trdmt1O55055 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.35■□□□□ 0.85
Trdmt1O55055 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trdmt1O55055 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Gm10231-201ENSMUST00000181584 441 ntBASIC20.34■□□□□ 0.85
Trdmt1O55055 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.34■□□□□ 0.85
Trdmt1O55055 Gm10175-202ENSMUST00000208752 441 ntBASIC20.34■□□□□ 0.85
Trdmt1O55055 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trdmt1O55055 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trdmt1O55055 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.34■□□□□ 0.85
Trdmt1O55055 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.34■□□□□ 0.85
Trdmt1O55055 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trdmt1O55055 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trdmt1O55055 Gm37292-201ENSMUST00000192062 758 ntBASIC20.33■□□□□ 0.85
Trdmt1O55055 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.33■□□□□ 0.85
Trdmt1O55055 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.33■□□□□ 0.85
Trdmt1O55055 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trdmt1O55055 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trdmt1O55055 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trdmt1O55055 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Trdmt1O55055 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trdmt1O55055 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trdmt1O55055 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trdmt1O55055 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Trdmt1O55055 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trdmt1O55055 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.32■□□□□ 0.84
Trdmt1O55055 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trdmt1O55055 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.31■□□□□ 0.84
Trdmt1O55055 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trdmt1O55055 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.31■□□□□ 0.84
Trdmt1O55055 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Trdmt1O55055 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trdmt1O55055 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.3■□□□□ 0.84
Trdmt1O55055 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Gm30025-201ENSMUST00000218555 728 ntBASIC20.3■□□□□ 0.84
Trdmt1O55055 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trdmt1O55055 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trdmt1O55055 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms