Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.57■□□□□ 0.56
ChkaO54804 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Gm13534-201ENSMUST00000121169 513 ntBASIC18.57■□□□□ 0.56
ChkaO54804 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.57■□□□□ 0.56
ChkaO54804 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.57■□□□□ 0.56
ChkaO54804 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ChkaO54804 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ChkaO54804 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ChkaO54804 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
ChkaO54804 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
ChkaO54804 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ChkaO54804 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ChkaO54804 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ChkaO54804 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.56■□□□□ 0.56
ChkaO54804 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChkaO54804 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ChkaO54804 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.55■□□□□ 0.56
ChkaO54804 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
ChkaO54804 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChkaO54804 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.55■□□□□ 0.56
ChkaO54804 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ChkaO54804 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.54■□□□□ 0.56
ChkaO54804 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ChkaO54804 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.54■□□□□ 0.56
ChkaO54804 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.54■□□□□ 0.56
ChkaO54804 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.54■□□□□ 0.56
ChkaO54804 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ChkaO54804 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChkaO54804 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
ChkaO54804 Gm13234-201ENSMUST00000120010 747 ntBASIC18.53■□□□□ 0.56
ChkaO54804 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.53■□□□□ 0.56
ChkaO54804 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.53■□□□□ 0.56
ChkaO54804 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ChkaO54804 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.53■□□□□ 0.56
ChkaO54804 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChkaO54804 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ChkaO54804 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChkaO54804 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.52■□□□□ 0.56
ChkaO54804 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChkaO54804 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChkaO54804 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChkaO54804 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChkaO54804 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
ChkaO54804 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.52■□□□□ 0.56
ChkaO54804 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.52■□□□□ 0.56
ChkaO54804 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ChkaO54804 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChkaO54804 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChkaO54804 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChkaO54804 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
ChkaO54804 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.51■□□□□ 0.55
ChkaO54804 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ChkaO54804 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ChkaO54804 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ChkaO54804 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ChkaO54804 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ChkaO54804 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ChkaO54804 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ChkaO54804 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChkaO54804 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms