Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptlc1O35704 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sptlc1O35704 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptlc1O35704 Mtag2-201ENSMUST00000058665 714 ntBASIC20.14■□□□□ 0.81
Sptlc1O35704 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptlc1O35704 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sptlc1O35704 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Sptlc1O35704 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sptlc1O35704 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sptlc1O35704 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.13■□□□□ 0.81
Sptlc1O35704 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sptlc1O35704 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptlc1O35704 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptlc1O35704 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.12■□□□□ 0.81
Sptlc1O35704 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.12■□□□□ 0.81
Sptlc1O35704 Zfp783-201ENSMUST00000095946 670 ntBASIC20.12■□□□□ 0.81
Sptlc1O35704 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptlc1O35704 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptlc1O35704 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptlc1O35704 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptlc1O35704 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.11■□□□□ 0.81
Sptlc1O35704 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.11■□□□□ 0.81
Sptlc1O35704 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sptlc1O35704 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sptlc1O35704 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.11■□□□□ 0.81
Sptlc1O35704 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.11■□□□□ 0.81
Sptlc1O35704 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptlc1O35704 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptlc1O35704 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.1■□□□□ 0.81
Sptlc1O35704 Gm37055-201ENSMUST00000191866 133 ntBASIC20.1■□□□□ 0.81
Sptlc1O35704 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sptlc1O35704 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sptlc1O35704 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptlc1O35704 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.09■□□□□ 0.81
Sptlc1O35704 Gm15565-201ENSMUST00000118890 427 ntBASIC20.09■□□□□ 0.81
Sptlc1O35704 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Sptlc1O35704 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.09■□□□□ 0.81
Sptlc1O35704 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptlc1O35704 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Sptlc1O35704 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.08■□□□□ 0.81
Sptlc1O35704 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.08■□□□□ 0.81
Sptlc1O35704 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptlc1O35704 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sptlc1O35704 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.07■□□□□ 0.8
Sptlc1O35704 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.07■□□□□ 0.8
Sptlc1O35704 Gm7977-201ENSMUST00000193787 748 ntBASIC20.07■□□□□ 0.8
Sptlc1O35704 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Sptlc1O35704 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sptlc1O35704 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sptlc1O35704 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms