Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Gm14859-201ENSMUST00000117752 357 ntBASIC18.41■□□□□ 0.54
Phox2bO35690 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.41■□□□□ 0.54
Phox2bO35690 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Phox2bO35690 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Phox2bO35690 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Phox2bO35690 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Phox2bO35690 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Phox2bO35690 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Phox2bO35690 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Phox2bO35690 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Phox2bO35690 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Phox2bO35690 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.39■□□□□ 0.53
Phox2bO35690 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.39■□□□□ 0.53
Phox2bO35690 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Phox2bO35690 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.38■□□□□ 0.53
Phox2bO35690 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.38■□□□□ 0.53
Phox2bO35690 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Phox2bO35690 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Phox2bO35690 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Phox2bO35690 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.37■□□□□ 0.53
Phox2bO35690 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.37■□□□□ 0.53
Phox2bO35690 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.37■□□□□ 0.53
Phox2bO35690 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Phox2bO35690 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.37■□□□□ 0.53
Phox2bO35690 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.36■□□□□ 0.53
Phox2bO35690 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.36■□□□□ 0.53
Phox2bO35690 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.36■□□□□ 0.53
Phox2bO35690 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Phox2bO35690 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Phox2bO35690 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Phox2bO35690 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Phox2bO35690 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Phox2bO35690 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Phox2bO35690 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.35■□□□□ 0.53
Phox2bO35690 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Phox2bO35690 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Phox2bO35690 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Phox2bO35690 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.34■□□□□ 0.53
Phox2bO35690 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Phox2bO35690 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Phox2bO35690 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Phox2bO35690 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Phox2bO35690 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.34■□□□□ 0.53
Phox2bO35690 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Phox2bO35690 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms