Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.79■□□□□ 0.76
Nr1i3O35627 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nr1i3O35627 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Rarb-207ENSMUST00000225921 2756 ntBASIC19.79■□□□□ 0.76
Nr1i3O35627 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.79■□□□□ 0.76
Nr1i3O35627 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1i3O35627 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1i3O35627 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1i3O35627 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1i3O35627 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nr1i3O35627 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1i3O35627 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nr1i3O35627 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.77■□□□□ 0.76
Nr1i3O35627 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.77■□□□□ 0.76
Nr1i3O35627 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Nr1i3O35627 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.77■□□□□ 0.76
Nr1i3O35627 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1i3O35627 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nr1i3O35627 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Nr1i3O35627 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.76■□□□□ 0.75
Nr1i3O35627 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nr1i3O35627 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.76■□□□□ 0.75
Nr1i3O35627 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1i3O35627 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nr1i3O35627 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.75■□□□□ 0.75
Nr1i3O35627 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.75■□□□□ 0.75
Nr1i3O35627 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nr1i3O35627 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nr1i3O35627 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1i3O35627 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Nr1i3O35627 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.74■□□□□ 0.75
Nr1i3O35627 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.74■□□□□ 0.75
Nr1i3O35627 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Tgds-204ENSMUST00000228543 1594 ntBASIC19.74■□□□□ 0.75
Nr1i3O35627 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1i3O35627 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Nr1i3O35627 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nr1i3O35627 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Nr1i3O35627 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1i3O35627 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nr1i3O35627 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nr1i3O35627 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1i3O35627 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nr1i3O35627 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms