Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Npc1O35604 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
Npc1O35604 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.92■□□□□ 0.46
Npc1O35604 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Npc1O35604 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Npc1O35604 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.92■□□□□ 0.46
Npc1O35604 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1O35604 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Npc1O35604 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Npc1O35604 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Npc1O35604 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Gm26524-201ENSMUST00000192339 390 ntBASIC17.91■□□□□ 0.46
Npc1O35604 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.91■□□□□ 0.46
Npc1O35604 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.91■□□□□ 0.46
Npc1O35604 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Npc1O35604 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.91■□□□□ 0.46
Npc1O35604 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1O35604 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.9■□□□□ 0.46
Npc1O35604 Rab3c-203ENSMUST00000224180 967 ntBASIC17.9■□□□□ 0.46
Npc1O35604 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Npc1O35604 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Npc1O35604 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.9■□□□□ 0.46
Npc1O35604 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Npc1O35604 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1O35604 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.9■□□□□ 0.46
Npc1O35604 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1O35604 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Npc1O35604 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.89■□□□□ 0.45
Npc1O35604 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Npc1O35604 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.89■□□□□ 0.45
Npc1O35604 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.89■□□□□ 0.45
Npc1O35604 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Npc1O35604 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1O35604 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.88■□□□□ 0.45
Npc1O35604 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Npc1O35604 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.88■□□□□ 0.45
Npc1O35604 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Npc1O35604 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Npc1O35604 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1O35604 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.87■□□□□ 0.45
Npc1O35604 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Npc1O35604 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.87■□□□□ 0.45
Npc1O35604 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.87■□□□□ 0.45
Npc1O35604 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.87■□□□□ 0.45
Npc1O35604 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.87■□□□□ 0.45
Npc1O35604 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.87■□□□□ 0.45
Npc1O35604 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.87■□□□□ 0.45
Npc1O35604 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1O35604 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.87■□□□□ 0.45
Npc1O35604 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1O35604 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1O35604 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1O35604 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms