Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Slc1a6O35544 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slc1a6O35544 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.11■□□□□ 0.49
Slc1a6O35544 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc1a6O35544 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.11■□□□□ 0.49
Slc1a6O35544 Fst-202ENSMUST00000223640 2612 ntBASIC18.1■□□□□ 0.49
Slc1a6O35544 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Slc1a6O35544 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.1■□□□□ 0.49
Slc1a6O35544 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slc1a6O35544 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc1a6O35544 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc1a6O35544 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.09■□□□□ 0.49
Slc1a6O35544 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slc1a6O35544 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc1a6O35544 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.09■□□□□ 0.49
Slc1a6O35544 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc1a6O35544 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc1a6O35544 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc1a6O35544 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc1a6O35544 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.08■□□□□ 0.48
Slc1a6O35544 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc1a6O35544 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Slc1a6O35544 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.08■□□□□ 0.48
Slc1a6O35544 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.08■□□□□ 0.48
Slc1a6O35544 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Slc1a6O35544 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.07■□□□□ 0.48
Slc1a6O35544 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc1a6O35544 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.07■□□□□ 0.48
Slc1a6O35544 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Slc1a6O35544 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc1a6O35544 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc1a6O35544 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Slc1a6O35544 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.06■□□□□ 0.48
Slc1a6O35544 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.06■□□□□ 0.48
Slc1a6O35544 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Slc1a6O35544 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc1a6O35544 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc1a6O35544 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc1a6O35544 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc1a6O35544 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc1a6O35544 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Slc1a6O35544 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc1a6O35544 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.05■□□□□ 0.48
Slc1a6O35544 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms