Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clk2O35491 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.05■□□□□ 0.8
Clk2O35491 Zfp783-201ENSMUST00000095946 670 ntBASIC20.05■□□□□ 0.8
Clk2O35491 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Clk2O35491 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clk2O35491 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clk2O35491 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Clk2O35491 Gm13158-201ENSMUST00000122007 736 ntBASIC20.04■□□□□ 0.8
Clk2O35491 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Clk2O35491 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.04■□□□□ 0.8
Clk2O35491 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clk2O35491 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk2O35491 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk2O35491 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.03■□□□□ 0.8
Clk2O35491 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk2O35491 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clk2O35491 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.03■□□□□ 0.8
Clk2O35491 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.03■□□□□ 0.8
Clk2O35491 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Clk2O35491 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clk2O35491 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.03■□□□□ 0.8
Clk2O35491 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clk2O35491 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Clk2O35491 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Clk2O35491 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.02■□□□□ 0.8
Clk2O35491 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clk2O35491 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clk2O35491 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Clk2O35491 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clk2O35491 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clk2O35491 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Gm10698-201ENSMUST00000182663 604 ntBASIC20.01■□□□□ 0.79
Clk2O35491 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.01■□□□□ 0.79
Clk2O35491 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clk2O35491 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Clk2O35491 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Clk2O35491 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20■□□□□ 0.79
Clk2O35491 H2-K2-201ENSMUST00000174250 1049 ntBASIC20■□□□□ 0.79
Clk2O35491 Alkbh1-212ENSMUST00000185301 408 ntBASIC20■□□□□ 0.79
Clk2O35491 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clk2O35491 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Gm5784-201ENSMUST00000179344 2478 ntBASIC20■□□□□ 0.79
Clk2O35491 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk2O35491 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20■□□□□ 0.79
Clk2O35491 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clk2O35491 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Gm38285-201ENSMUST00000192928 922 ntBASIC19.99■□□□□ 0.79
Clk2O35491 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.99■□□□□ 0.79
Clk2O35491 Gm10252-201ENSMUST00000209541 832 ntBASIC19.99■□□□□ 0.79
Clk2O35491 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clk2O35491 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk2O35491 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.98■□□□□ 0.79
Clk2O35491 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.98■□□□□ 0.79
Clk2O35491 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.98■□□□□ 0.79
Clk2O35491 Mtag2-201ENSMUST00000058665 714 ntBASIC19.98■□□□□ 0.79
Clk2O35491 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk2O35491 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms