Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pkd1O08852 Gm22697-201ENSMUST00000175194 63 ntBASIC11.77□□□□□ -0.53
Pkd1O08852 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pkd1O08852 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.77□□□□□ -0.53
Pkd1O08852 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC11.76□□□□□ -0.53
Pkd1O08852 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.76□□□□□ -0.53
Pkd1O08852 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.76□□□□□ -0.53
Pkd1O08852 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pkd1O08852 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Pkd1O08852 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pkd1O08852 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.75□□□□□ -0.53
Pkd1O08852 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Pkd1O08852 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pkd1O08852 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Gm38285-201ENSMUST00000192928 922 ntBASIC11.75□□□□□ -0.53
Pkd1O08852 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Pkd1O08852 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.75□□□□□ -0.53
Pkd1O08852 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pkd1O08852 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.75□□□□□ -0.53
Pkd1O08852 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pkd1O08852 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pkd1O08852 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.74□□□□□ -0.53
Pkd1O08852 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.74□□□□□ -0.53
Pkd1O08852 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pkd1O08852 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pkd1O08852 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pkd1O08852 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pkd1O08852 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.74□□□□□ -0.53
Pkd1O08852 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pkd1O08852 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.74□□□□□ -0.53
Pkd1O08852 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pkd1O08852 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC11.73□□□□□ -0.53
Pkd1O08852 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.73□□□□□ -0.53
Pkd1O08852 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pkd1O08852 Mir2861-201ENSMUST00000175539 82 ntBASIC11.72□□□□□ -0.53
Pkd1O08852 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pkd1O08852 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms