Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf11bO08712 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 Rarb-207ENSMUST00000225921 2756 ntBASIC18.69■□□□□ 0.58
Tnfrsf11bO08712 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Gm13234-201ENSMUST00000120010 747 ntBASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11bO08712 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11bO08712 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11bO08712 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11bO08712 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf11bO08712 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf11bO08712 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf11bO08712 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms