Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3415J3QMS8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3415J3QMS8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Gm3415J3QMS8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3415J3QMS8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3415J3QMS8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Gm3415J3QMS8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.58■□□□□ 0.73
Gm3415J3QMS8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3415J3QMS8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3415J3QMS8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3415J3QMS8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm3415J3QMS8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3415J3QMS8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3415J3QMS8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms