Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim55G3X8Y1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Gm15546-201ENSMUST00000122095 826 ntBASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim55G3X8Y1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim55G3X8Y1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.85■□□□□ 0.61
Trim55G3X8Y1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim55G3X8Y1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim55G3X8Y1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim55G3X8Y1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trim55G3X8Y1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms