Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Gm13146-201ENSMUST00000118508 780 ntBASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh9F8VPK8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh9F8VPK8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh9F8VPK8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh9F8VPK8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh9F8VPK8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Pcdh9F8VPK8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh9F8VPK8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh9F8VPK8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh9F8VPK8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pcdh9F8VPK8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.82■□□□□ 0.6
Pcdh9F8VPK8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Gm13534-201ENSMUST00000121169 513 ntBASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Reep4-203ENSMUST00000226563 1444 ntBASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh9F8VPK8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh9F8VPK8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms