Protein–RNA interactions for Protein: D3Z6R0

Gm5478, Predicted pseudogene 5478, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5478D3Z6R0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5478D3Z6R0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm5478D3Z6R0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Gm16437-201ENSMUST00000025669 507 ntBASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Gm9806-201ENSMUST00000051080 552 ntBASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm5478D3Z6R0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5478D3Z6R0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Gm7143-201ENSMUST00000222811 859 ntBASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5478D3Z6R0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm5478D3Z6R0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm5478D3Z6R0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm5478D3Z6R0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5478D3Z6R0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
Gm5478D3Z6R0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5478D3Z6R0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5478D3Z6R0 Scarna2-201ENSMUST00000157560 414 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms