Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc78D3Z5T1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc78D3Z5T1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc78D3Z5T1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc78D3Z5T1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc78D3Z5T1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc78D3Z5T1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc78D3Z5T1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc78D3Z5T1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ccdc78D3Z5T1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc78D3Z5T1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc78D3Z5T1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc78D3Z5T1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Gm2399-201ENSMUST00000104944 225 ntBASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc78D3Z5T1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc78D3Z5T1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc78D3Z5T1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc78D3Z5T1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms