Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shank1D3YZU1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shank1D3YZU1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.46■□□□□ 0.23
Shank1D3YZU1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Shank1D3YZU1 Mtag2-201ENSMUST00000058665 714 ntBASIC16.46■□□□□ 0.23
Shank1D3YZU1 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.46■□□□□ 0.22
Shank1D3YZU1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shank1D3YZU1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.45■□□□□ 0.22
Shank1D3YZU1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.45■□□□□ 0.22
Shank1D3YZU1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Flg-201ENSMUST00000050758 1488 ntBASIC16.45■□□□□ 0.22
Shank1D3YZU1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank1D3YZU1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Gm43183-201ENSMUST00000200632 547 ntBASIC16.44■□□□□ 0.22
Shank1D3YZU1 Timm23-208ENSMUST00000226683 750 ntBASIC16.44■□□□□ 0.22
Shank1D3YZU1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank1D3YZU1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.43■□□□□ 0.22
Shank1D3YZU1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.43■□□□□ 0.22
Shank1D3YZU1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Zfp783-201ENSMUST00000095946 670 ntBASIC16.43■□□□□ 0.22
Shank1D3YZU1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.43■□□□□ 0.22
Shank1D3YZU1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank1D3YZU1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Gm23634-201ENSMUST00000175071 91 ntBASIC16.42■□□□□ 0.22
Shank1D3YZU1 Odf3b-204ENSMUST00000227834 930 ntBASIC16.42■□□□□ 0.22
Shank1D3YZU1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank1D3YZU1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shank1D3YZU1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.41■□□□□ 0.22
Shank1D3YZU1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shank1D3YZU1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.41■□□□□ 0.22
Shank1D3YZU1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.41■□□□□ 0.22
Shank1D3YZU1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank1D3YZU1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms