Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim30cD3YVI9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim30cD3YVI9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
Trim30cD3YVI9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim30cD3YVI9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim30cD3YVI9 Gm26571-201ENSMUST00000181399 666 ntBASIC20■□□□□ 0.79
Trim30cD3YVI9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20■□□□□ 0.79
Trim30cD3YVI9 Slc35b2-207ENSMUST00000226086 850 ntBASIC20■□□□□ 0.79
Trim30cD3YVI9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20■□□□□ 0.79
Trim30cD3YVI9 Gm42939-201ENSMUST00000197514 2205 ntBASIC20■□□□□ 0.79
Trim30cD3YVI9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim30cD3YVI9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim30cD3YVI9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Gm42569-201ENSMUST00000200539 472 ntBASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.98■□□□□ 0.79
Trim30cD3YVI9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim30cD3YVI9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim30cD3YVI9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms