Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Chd6A3KFM7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd6A3KFM7 Gm14057-201ENSMUST00000120631 482 ntBASIC15.05■□□□□ 0
Chd6A3KFM7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd6A3KFM7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd6A3KFM7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Chd6A3KFM7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd6A3KFM7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd6A3KFM7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd6A3KFM7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.05■□□□□ -0
Chd6A3KFM7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.05■□□□□ -0
Chd6A3KFM7 Gm43347-201ENSMUST00000200226 580 ntBASIC15.05■□□□□ -0
Chd6A3KFM7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Chd6A3KFM7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chd6A3KFM7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chd6A3KFM7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd6A3KFM7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd6A3KFM7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd6A3KFM7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd6A3KFM7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.04■□□□□ -0
Chd6A3KFM7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.04■□□□□ -0
Chd6A3KFM7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd6A3KFM7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd6A3KFM7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd6A3KFM7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.03■□□□□ -0
Chd6A3KFM7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.03■□□□□ -0
Chd6A3KFM7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd6A3KFM7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.02■□□□□ -0
Chd6A3KFM7 Gm9013-201ENSMUST00000132939 882 ntBASIC15.02■□□□□ -0
Chd6A3KFM7 Gm2274-201ENSMUST00000184539 609 ntBASIC15.02■□□□□ -0
Chd6A3KFM7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd6A3KFM7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd6A3KFM7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd6A3KFM7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chd6A3KFM7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chd6A3KFM7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.02□□□□□ -0.01
Chd6A3KFM7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd6A3KFM7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chd6A3KFM7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd6A3KFM7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Gm11927-201ENSMUST00000118472 759 ntBASIC15.01□□□□□ -0.01
Chd6A3KFM7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd6A3KFM7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.01□□□□□ -0.01
Chd6A3KFM7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15□□□□□ -0.01
Chd6A3KFM7 Gm9449-201ENSMUST00000207265 1011 ntBASIC15□□□□□ -0.01
Chd6A3KFM7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15□□□□□ -0.01
Chd6A3KFM7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chd6A3KFM7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd6A3KFM7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm8097-201ENSMUST00000117903 829 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 Gm7370-201ENSMUST00000219471 767 ntBASIC14.99□□□□□ -0.01
Chd6A3KFM7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms