Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Gm11927-201ENSMUST00000118472 759 ntBASIC9.8□□□□□ -0.84
Ubr4A2AN08 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 AC153962.1-201ENSMUST00000218530 1948 ntBASIC9.8□□□□□ -0.84
Ubr4A2AN08 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Gm2651-201ENSMUST00000203560 838 ntBASIC9.8□□□□□ -0.84
Ubr4A2AN08 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Mir5126-201ENSMUST00000175513 77 ntBASIC9.8□□□□□ -0.84
Ubr4A2AN08 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC9.79□□□□□ -0.84
Ubr4A2AN08 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Ubr4A2AN08 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Gm17808-201ENSMUST00000200859 894 ntBASIC9.79□□□□□ -0.84
Ubr4A2AN08 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ubr4A2AN08 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Ubr4A2AN08 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Gm17641-201ENSMUST00000166328 2350 ntBASIC9.78□□□□□ -0.84
Ubr4A2AN08 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ubr4A2AN08 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC9.78□□□□□ -0.84
Ubr4A2AN08 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Ubr4A2AN08 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Ubr4A2AN08 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ubr4A2AN08 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ubr4A2AN08 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ubr4A2AN08 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ubr4A2AN08 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 AV026068-213ENSMUST00000223675 1171 ntBASIC9.77□□□□□ -0.85
Ubr4A2AN08 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ubr4A2AN08 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms